Yes, you can change both the cumin and jalapenos – you don’t want to change the amount of tomatoes or acidity (or drastically change the peppers). I think others in the comment thread have said bottled lime juice works ok as a substitute. I can’t speak to the canning safety on that, but it’s probably fine. Glad the blanching skin method is working so well!

One thing though, I have never heard of simmering it. I switch up making mine to where I add all ingredients into a food processor and process until well mixed and chopped and then serve, or I only place the tomatoes and spices in the food processor and process until well chopped and then add the finely chopped onions, jalapenos and cilantro and then mix manually until all is well mixed. This makes for a chunkier salsa, and again I serve immediately.
I have made this salsa for the last several summers and we love it! This year I have a bunch of extra peaches and I was wondering if you have ever added fruit to this recipe? My understanding from the class I took through the extension service is that it is not a problem to add fruit to a salsa as it is an acidic ingredient. I just wondered if you had ever tried.
I’ve been canning for over 40 years. (geez, that just depressed me! – ha!) This is a good recipe. You can taste the vinegar initially, but that will mellow. I just canned this yesterday, and my (picky) family still wanted it today and I only received compliments. I bought a 22 lb box of tomatoes – don’t know a name – but big & and canning tomatoes. Normally, I would have gotten Roma’s, but they’re boring. So what if salsa has tomato seeds? But – yes, purchase a HUGE colander (hard to find) and drain them for at least an hour & a half. So! This is what I’m trying to get to! My advise is: have everything for however many batches you want to do ready, except the tomatoes. Do one batch at a time, letting the next tomatoes drain while working on the first. My yield from each batch was exactly 7 pints – perfect for my water bath canner. So, 22 lbs = 21 pints. I left out the sugar & tomato paste. Its “medium”, flavorful, and perfect consistancy.

I added a tea spoon of fine ground hot pepper. now thats the slight hot I like and no tomato paste. I like it wet …Great recipe. the first time I ever made salsa and I am glad I found the perfect recipe.. on top of it all. its just like a recipe of a so called semi friend. that had his own recipe I liked and he wouldnt give it up. well ..he can bite this. now!! I got it. if not better ..ha ha !! you and your grand mother knew your stuff… Thanks !! 
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